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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARID3BAT-rich interaction domain 3B. (552 aa)    
Predicted Functional Partners:
SAP30
Sin3A associated protein 30.
    
 0.712
SMARCB1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.
    
 
 0.703
PBRM1
Polybromo 1.
   
 
 0.700
ARID3A
AT-rich interaction domain 3A.
   
  
0.649
ENSMEUP00000012060
annotation not available
    
 
 0.639
RBL2
RB transcriptional corepressor like 2.
    
 
 0.637
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 
 0.627
ENSMEUP00000012435
annotation not available
    
 0.621
RBBP4
RB binding protein 4, chromatin remodeling factor.
    
 0.621
ACTL6A
Actin like 6A.
    
 
 0.620
Your Current Organism:
Notamacropus eugenii
NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.