Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRKRAProtein activator of interferon induced protein kinase EIF2AK2. (291 aa)    
Predicted Functional Partners:
ENSMEUP00000000576
annotation not available
    
 0.998
AGO2
Argonaute RISC catalytic component 2.
    
 0.996
TARBP2
TARBP2 subunit of RISC loading complex.
    
 0.996
DROSHA
Drosha ribonuclease III.
    
 0.977
DGCR8
DGCR8 microprocessor complex subunit.
    
 0.967
ENSMEUP00000001366
annotation not available
    
 0.963
XPO5
Exportin 5.
    
 0.962
STAU1
Staufen double-stranded RNA binding protein 1.
    
 0.959
POP1
POP1 homolog, ribonuclease P/MRP subunit.
    
  0.957
DDX6
DEAD-box helicase 6.
    
 0.936
Your Current Organism:
Notamacropus eugenii
NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby
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