ENSMEUP00000002425 protein (Notamacropus eugenii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSMEUP00000002425

annotation not available (836 aa)

Predicted Functional Partners:

PCGF1

0.957

YAF2

0.886

PCGF6

0.816

ENSMEUP00000010796

0.771

ENSMEUP00000007980

0.604

ENSMEUP00000006436

0.580

ENSMEUP00000009623

0.578

GATAD2B

0.567

ENSMEUP00000001202

0.562

ALKBH1

0.562

Your Current Organism:

Notamacropus eugenii

NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALKBH1	ENSMEUP00000002425	ENSMEUP00000013691	ENSMEUP00000002425	alkB homolog 1, histone H2A dioxygenase.	annotation not available	0.562
ALKBH1	ENSMEUP00000007980	ENSMEUP00000013691	ENSMEUP00000007980	alkB homolog 1, histone H2A dioxygenase.	annotation not available	0.410
ENSMEUP00000001202	ENSMEUP00000002425	ENSMEUP00000001202	ENSMEUP00000002425	annotation not available	annotation not available	0.562
ENSMEUP00000002425	ALKBH1	ENSMEUP00000002425	ENSMEUP00000013691	annotation not available	alkB homolog 1, histone H2A dioxygenase.	0.562
ENSMEUP00000002425	ENSMEUP00000001202	ENSMEUP00000002425	ENSMEUP00000001202	annotation not available	annotation not available	0.562
ENSMEUP00000002425	ENSMEUP00000006436	ENSMEUP00000002425	ENSMEUP00000006436	annotation not available	annotation not available	0.580
ENSMEUP00000002425	ENSMEUP00000007980	ENSMEUP00000002425	ENSMEUP00000007980	annotation not available	annotation not available	0.604
ENSMEUP00000002425	ENSMEUP00000009623	ENSMEUP00000002425	ENSMEUP00000009623	annotation not available	annotation not available	0.578
ENSMEUP00000002425	ENSMEUP00000010796	ENSMEUP00000002425	ENSMEUP00000010796	annotation not available	annotation not available	0.771
ENSMEUP00000002425	GATAD2B	ENSMEUP00000002425	ENSMEUP00000006900	annotation not available	GATA zinc finger domain containing 2B.	0.567
ENSMEUP00000002425	PCGF1	ENSMEUP00000002425	ENSMEUP00000014801	annotation not available	Polycomb group ring finger 1.	0.957
ENSMEUP00000002425	PCGF6	ENSMEUP00000002425	ENSMEUP00000008023	annotation not available	Polycomb group ring finger 6.	0.816
ENSMEUP00000002425	YAF2	ENSMEUP00000002425	ENSMEUP00000011283	annotation not available	YY1 associated factor 2.	0.886
ENSMEUP00000006436	ENSMEUP00000002425	ENSMEUP00000006436	ENSMEUP00000002425	annotation not available	annotation not available	0.580
ENSMEUP00000006436	ENSMEUP00000009623	ENSMEUP00000006436	ENSMEUP00000009623	annotation not available	annotation not available	0.908
ENSMEUP00000006436	PCGF1	ENSMEUP00000006436	ENSMEUP00000014801	annotation not available	Polycomb group ring finger 1.	0.668
ENSMEUP00000006436	PCGF6	ENSMEUP00000006436	ENSMEUP00000008023	annotation not available	Polycomb group ring finger 6.	0.668
ENSMEUP00000006436	YAF2	ENSMEUP00000006436	ENSMEUP00000011283	annotation not available	YY1 associated factor 2.	0.758
ENSMEUP00000007980	ALKBH1	ENSMEUP00000007980	ENSMEUP00000013691	annotation not available	alkB homolog 1, histone H2A dioxygenase.	0.410
ENSMEUP00000007980	ENSMEUP00000002425	ENSMEUP00000007980	ENSMEUP00000002425	annotation not available	annotation not available	0.604