ENSMEUP00000002639 protein (Notamacropus eugenii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSMEUP00000002639

annotation not available (112 aa)

Predicted Functional Partners:

ENSMEUP00000012905

0.999

ENSMEUP00000008528

0.984

ENSMEUP00000012380

0.982

PPIL1

0.980

SRRM1

0.978

ENSMEUP00000010535

0.977

UPF3B

0.972

ALYREF

0.970

EFTUD2

0.970

ENSMEUP00000005328

0.968

Your Current Organism:

Notamacropus eugenii

NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALYREF	EFTUD2	ENSMEUP00000002015	ENSMEUP00000014276	Aly/REF export factor.	Elongation factor Tu GTP binding domain containing 2.	0.841
ALYREF	ENSMEUP00000002639	ENSMEUP00000002015	ENSMEUP00000002639	Aly/REF export factor.	annotation not available	0.970
ALYREF	ENSMEUP00000008528	ENSMEUP00000002015	ENSMEUP00000008528	Aly/REF export factor.	annotation not available	0.737
ALYREF	ENSMEUP00000010535	ENSMEUP00000002015	ENSMEUP00000010535	Aly/REF export factor.	annotation not available	0.914
ALYREF	ENSMEUP00000012380	ENSMEUP00000002015	ENSMEUP00000012380	Aly/REF export factor.	annotation not available	0.942
ALYREF	ENSMEUP00000012905	ENSMEUP00000002015	ENSMEUP00000012905	Aly/REF export factor.	annotation not available	0.970
ALYREF	PPIL1	ENSMEUP00000002015	ENSMEUP00000000920	Aly/REF export factor.	Peptidylprolyl isomerase like 1.	0.975
ALYREF	SRRM1	ENSMEUP00000002015	ENSMEUP00000013430	Aly/REF export factor.	Serine and arginine repetitive matrix 1.	0.994
ALYREF	UPF3B	ENSMEUP00000002015	ENSMEUP00000014259	Aly/REF export factor.	UPF3B regulator of nonsense mediated mRNA decay.	0.998
EFTUD2	ALYREF	ENSMEUP00000014276	ENSMEUP00000002015	Elongation factor Tu GTP binding domain containing 2.	Aly/REF export factor.	0.841
EFTUD2	ENSMEUP00000002639	ENSMEUP00000014276	ENSMEUP00000002639	Elongation factor Tu GTP binding domain containing 2.	annotation not available	0.970
EFTUD2	ENSMEUP00000005328	ENSMEUP00000014276	ENSMEUP00000005328	Elongation factor Tu GTP binding domain containing 2.	annotation not available	0.942
EFTUD2	ENSMEUP00000008528	ENSMEUP00000014276	ENSMEUP00000008528	Elongation factor Tu GTP binding domain containing 2.	annotation not available	0.993
EFTUD2	ENSMEUP00000010535	ENSMEUP00000014276	ENSMEUP00000010535	Elongation factor Tu GTP binding domain containing 2.	annotation not available	0.849
EFTUD2	ENSMEUP00000012380	ENSMEUP00000014276	ENSMEUP00000012380	Elongation factor Tu GTP binding domain containing 2.	annotation not available	0.518
EFTUD2	ENSMEUP00000012905	ENSMEUP00000014276	ENSMEUP00000012905	Elongation factor Tu GTP binding domain containing 2.	annotation not available	0.993
EFTUD2	PPIL1	ENSMEUP00000014276	ENSMEUP00000000920	Elongation factor Tu GTP binding domain containing 2.	Peptidylprolyl isomerase like 1.	0.987
EFTUD2	SRRM1	ENSMEUP00000014276	ENSMEUP00000013430	Elongation factor Tu GTP binding domain containing 2.	Serine and arginine repetitive matrix 1.	0.802
ENSMEUP00000002639	ALYREF	ENSMEUP00000002639	ENSMEUP00000002015	annotation not available	Aly/REF export factor.	0.970
ENSMEUP00000002639	EFTUD2	ENSMEUP00000002639	ENSMEUP00000014276	annotation not available	Elongation factor Tu GTP binding domain containing 2.	0.970