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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSEN34tRNA splicing endonuclease subunit 34. (272 aa)    
Predicted Functional Partners:
ENSMEUP00000012909
annotation not available
    
 0.966
TSEN54
tRNA splicing endonuclease subunit 54.
   
 0.890
CLP1
Cleavage and polyadenylation factor I subunit 1.
    
 0.835
ENSMEUP00000007133
annotation not available
    
 0.712
POLR3E
RNA polymerase III subunit E.
   
    0.675
RARS2
arginyl-tRNA synthetase 2, mitochondrial.
     
 0.569
TRPT1
tRNA phosphotransferase 1.
      
 0.567
ELAC2
elaC ribonuclease Z 2.
  
  
 0.560
ENSMEUP00000005997
annotation not available
      
 0.527
RBM14
RNA binding motif protein 14.
      
 0.475
Your Current Organism:
Notamacropus eugenii
NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.