ENSMEUP00000003080 protein (Notamacropus eugenii)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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Co-occurrence

Co-expression

Experiments

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[Homology]

Score

ENSMEUP00000003080

annotation not available (301 aa)

Predicted Functional Partners:

PTPN6

0.706

ENSMEUP00000008156

0.647

PTPN11

0.619

ENSMEUP00000011951

0.619

ENSMEUP00000011373

0.614

ENSMEUP00000007160

0.586

NTNG1

0.579

PLA2G4A

0.571

ENSMEUP00000002946

0.493

LRIT1

0.493

Your Current Organism:

Notamacropus eugenii

NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMEUP00000002946	ENSMEUP00000003080	ENSMEUP00000002946	ENSMEUP00000003080	annotation not available	annotation not available	0.493
ENSMEUP00000002946	ENSMEUP00000008156	ENSMEUP00000002946	ENSMEUP00000008156	annotation not available	annotation not available	0.580
ENSMEUP00000002946	ENSMEUP00000011951	ENSMEUP00000002946	ENSMEUP00000011951	annotation not available	annotation not available	0.466
ENSMEUP00000002946	LRIT1	ENSMEUP00000002946	ENSMEUP00000007174	annotation not available	Leucine rich repeat, Ig-like and transmembrane domains 1.	0.573
ENSMEUP00000002946	NTNG1	ENSMEUP00000002946	ENSMEUP00000001208	annotation not available	Netrin G1.	0.893
ENSMEUP00000002946	PTPN11	ENSMEUP00000002946	ENSMEUP00000006693	annotation not available	Protein tyrosine phosphatase non-receptor type 11.	0.466
ENSMEUP00000002946	PTPN6	ENSMEUP00000002946	ENSMEUP00000014612	annotation not available	Protein tyrosine phosphatase non-receptor type 6.	0.466
ENSMEUP00000003080	ENSMEUP00000002946	ENSMEUP00000003080	ENSMEUP00000002946	annotation not available	annotation not available	0.493
ENSMEUP00000003080	ENSMEUP00000007160	ENSMEUP00000003080	ENSMEUP00000007160	annotation not available	annotation not available	0.586
ENSMEUP00000003080	ENSMEUP00000008156	ENSMEUP00000003080	ENSMEUP00000008156	annotation not available	annotation not available	0.647
ENSMEUP00000003080	ENSMEUP00000011373	ENSMEUP00000003080	ENSMEUP00000011373	annotation not available	annotation not available	0.614
ENSMEUP00000003080	ENSMEUP00000011951	ENSMEUP00000003080	ENSMEUP00000011951	annotation not available	annotation not available	0.619
ENSMEUP00000003080	LRIT1	ENSMEUP00000003080	ENSMEUP00000007174	annotation not available	Leucine rich repeat, Ig-like and transmembrane domains 1.	0.493
ENSMEUP00000003080	NTNG1	ENSMEUP00000003080	ENSMEUP00000001208	annotation not available	Netrin G1.	0.579
ENSMEUP00000003080	PLA2G4A	ENSMEUP00000003080	ENSMEUP00000015208	annotation not available	Phospholipase A2 group IVA.	0.571
ENSMEUP00000003080	PTPN11	ENSMEUP00000003080	ENSMEUP00000006693	annotation not available	Protein tyrosine phosphatase non-receptor type 11.	0.619
ENSMEUP00000003080	PTPN6	ENSMEUP00000003080	ENSMEUP00000014612	annotation not available	Protein tyrosine phosphatase non-receptor type 6.	0.706
ENSMEUP00000007160	ENSMEUP00000003080	ENSMEUP00000007160	ENSMEUP00000003080	annotation not available	annotation not available	0.586
ENSMEUP00000007160	ENSMEUP00000008156	ENSMEUP00000007160	ENSMEUP00000008156	annotation not available	annotation not available	0.579
ENSMEUP00000008156	ENSMEUP00000002946	ENSMEUP00000008156	ENSMEUP00000002946	annotation not available	annotation not available	0.580