Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PPARAPeroxisome proliferator activated receptor alpha. (468 aa)    
Predicted Functional Partners:
PPARGC1A
PPARG coactivator 1 alpha.
    
 0.997
ENSMEUP00000008872
annotation not available
   
 0.990
ENSMEUP00000012723
annotation not available
   
 0.990
SIRT1
Sirtuin 1.
    
 0.986
NCOR1
Nuclear receptor corepressor 1.
    
 0.986
NCOR2
Nuclear receptor corepressor 2.
    
 0.982
ENSMEUP00000010093
annotation not available
    
 0.980
RXRB
Retinoid X receptor beta.
   
 0.979
ENSMEUP00000010178
annotation not available
    
 0.979
EP300
E1A binding protein p300.
    
 0.979
Your Current Organism:
Notamacropus eugenii
NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby
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