TXN protein (Notamacropus eugenii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

TXN

Thioredoxin. (98 aa)

Predicted Functional Partners:

ENSMEUP00000005493

0.998

TXNIP

0.997

MAP3K6

0.977

MSRA

0.976

PRDX5

0.974

PRDX2

0.969

PRDX1

0.969

ENSMEUP00000000636

0.928

ENSMEUP00000014986

0.928

AIFM1

0.923

Your Current Organism:

Notamacropus eugenii

NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIFM1	ENSMEUP00000000636	ENSMEUP00000006294	ENSMEUP00000000636	Apoptosis inducing factor mitochondria associated 1.	annotation not available	0.577
AIFM1	ENSMEUP00000005493	ENSMEUP00000006294	ENSMEUP00000005493	Apoptosis inducing factor mitochondria associated 1.	annotation not available	0.539
AIFM1	ENSMEUP00000014986	ENSMEUP00000006294	ENSMEUP00000014986	Apoptosis inducing factor mitochondria associated 1.	annotation not available	0.577
AIFM1	MAP3K6	ENSMEUP00000006294	ENSMEUP00000009497	Apoptosis inducing factor mitochondria associated 1.	Mitogen-activated protein kinase kinase kinase 6.	0.505
AIFM1	TXN	ENSMEUP00000006294	ENSMEUP00000003207	Apoptosis inducing factor mitochondria associated 1.	Thioredoxin.	0.923
ENSMEUP00000000636	AIFM1	ENSMEUP00000000636	ENSMEUP00000006294	annotation not available	Apoptosis inducing factor mitochondria associated 1.	0.577
ENSMEUP00000000636	ENSMEUP00000014986	ENSMEUP00000000636	ENSMEUP00000014986	annotation not available	annotation not available	0.851
ENSMEUP00000000636	PRDX1	ENSMEUP00000000636	ENSMEUP00000006216	annotation not available	Peroxiredoxin 1.	0.542
ENSMEUP00000000636	PRDX2	ENSMEUP00000000636	ENSMEUP00000005468	annotation not available	Peroxiredoxin 2.	0.542
ENSMEUP00000000636	PRDX5	ENSMEUP00000000636	ENSMEUP00000000879	annotation not available	Peroxiredoxin 5.	0.781
ENSMEUP00000000636	TXN	ENSMEUP00000000636	ENSMEUP00000003207	annotation not available	Thioredoxin.	0.928
ENSMEUP00000005493	AIFM1	ENSMEUP00000005493	ENSMEUP00000006294	annotation not available	Apoptosis inducing factor mitochondria associated 1.	0.539
ENSMEUP00000005493	MAP3K6	ENSMEUP00000005493	ENSMEUP00000009497	annotation not available	Mitogen-activated protein kinase kinase kinase 6.	0.934
ENSMEUP00000005493	TXN	ENSMEUP00000005493	ENSMEUP00000003207	annotation not available	Thioredoxin.	0.998
ENSMEUP00000005493	TXNIP	ENSMEUP00000005493	ENSMEUP00000002206	annotation not available	Thioredoxin interacting protein.	0.544
ENSMEUP00000014986	AIFM1	ENSMEUP00000014986	ENSMEUP00000006294	annotation not available	Apoptosis inducing factor mitochondria associated 1.	0.577
ENSMEUP00000014986	ENSMEUP00000000636	ENSMEUP00000014986	ENSMEUP00000000636	annotation not available	annotation not available	0.851
ENSMEUP00000014986	PRDX1	ENSMEUP00000014986	ENSMEUP00000006216	annotation not available	Peroxiredoxin 1.	0.550
ENSMEUP00000014986	PRDX2	ENSMEUP00000014986	ENSMEUP00000005468	annotation not available	Peroxiredoxin 2.	0.542
ENSMEUP00000014986	PRDX5	ENSMEUP00000014986	ENSMEUP00000000879	annotation not available	Peroxiredoxin 5.	0.781