STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMEUP00000003316annotation not available (1218 aa)    
Predicted Functional Partners:
VCP
Valosin containing protein.
    
 
 0.982
ENSMEUP00000003598
annotation not available
    
 
 0.977
ENSMEUP00000013327
annotation not available
    
 
 0.971
ENSMEUP00000000458
annotation not available
    
 
 0.964
UBXN7
UBX domain protein 7.
   
 
 0.960
FAAP100
FA core complex associated protein 100.
    
 
 0.816
ENSMEUP00000012644
annotation not available
    
 0.771
CDK1
Cyclin dependent kinase 1.
   
 
 0.742
SPATA5
Spermatogenesis associated 5.
    
 
 0.740
SPATA5L1
Spermatogenesis associated 5 like 1.
    
 
 0.740
Your Current Organism:
Notamacropus eugenii
NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.