Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SHROOM2Shroom family member 2. (1581 aa)    
Predicted Functional Partners:
WWC3
WWC family member 3.
      
 0.815
CLCN4
Chloride voltage-gated channel 4.
      
 0.692
ACTR8
Actin related protein 8.
    
 0.687
ENSMEUP00000005575
annotation not available
    
 0.684
RUVBL1
RuvB like AAA ATPase 1.
    
 0.673
ENSMEUP00000003691
annotation not available
    
 0.642
RUVBL2
RuvB like AAA ATPase 2.
   
 0.633
ENSMEUP00000014162
annotation not available
    
 0.607
SUPT16H
SPT16 homolog, facilitates chromatin remodeling subunit.
   
 0.598
ACTL6A
Actin like 6A.
   
 0.584
Your Current Organism:
Notamacropus eugenii
NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby
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