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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATG4BAutophagy related 4B cysteine peptidase. (387 aa)    
Predicted Functional Partners:
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.988
GABARAPL1
GABA type A receptor associated protein like 1.
   
 0.972
GABARAP
GABA type A receptor-associated protein.
   
 0.972
MAP1LC3A
Microtubule associated protein 1 light chain 3 alpha.
   
 0.923
ENSMEUP00000013144
annotation not available
   
 0.923
MAP1LC3C
Microtubule associated protein 1 light chain 3 gamma.
   
 0.914
ATG4A
Autophagy related 4A cysteine peptidase.
  
  
0.899
ULK2
Unc-51 like autophagy activating kinase 2.
   
 
 0.865
ULK1
Unc-51 like autophagy activating kinase 1.
   
 
 0.864
ATG3
Autophagy related 3.
   
 
 0.819
Your Current Organism:
Notamacropus eugenii
NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.