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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POLLDNA polymerase lambda. (575 aa)    
Predicted Functional Partners:
PNKP
Polynucleotide kinase 3'-phosphatase.
    
 0.893
ENSMEUP00000011576
annotation not available
  
 0.868
FEN1
Flap structure-specific endonuclease 1.
   
 0.831
APEX1
Apurinic/apyrimidinic endodeoxyribonuclease 1.
    
 0.826
LIG3
DNA ligase 3.
  
 0.821
NEIL1
Nei like DNA glycosylase 1.
   
 0.796
PCNA
Proliferating cell nuclear antigen.
    
 0.784
XRCC5
X-ray repair cross complementing 5.
     
 0.771
PRKDC
Protein kinase, DNA-activated, catalytic subunit.
     
 0.771
TDP1
tyrosyl-DNA phosphodiesterase 1.
    
 
 0.753
Your Current Organism:
Notamacropus eugenii
NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.