Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GJB1Gap junction protein beta 1. (283 aa)    
Predicted Functional Partners:
GJC2
Gap junction protein gamma 2.
   
 
 0.932
GJA1
Gap junction protein alpha 1.
    
 0.930
GJB3
Gap junction protein beta 3.
    
  0.930
GJA4
Gap junction protein alpha 4.
    
 0.930
GJC1
Gap junction protein gamma 1.
   
 
  0.922
GJA10
Gap junction protein alpha 10.
     
  0.922
ENSMEUP00000006178
annotation not available
     
  0.922
GJD2
Gap junction protein delta 2.
   
 
  0.922
TGFB1
Transforming growth factor beta 1.
     
 0.859
TGFB2
Transforming growth factor beta 2.
     
  0.859
Your Current Organism:
Notamacropus eugenii
NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby
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