ENSMEUP00000003989 protein (Notamacropus eugenii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSMEUP00000003989

annotation not available (230 aa)

Predicted Functional Partners:

ENSMEUP00000011194

0.998

ENSMEUP00000014420

0.998

ENSMEUP00000001656

0.981

ENSMEUP00000008664

0.951

ENSMEUP00000002382

0.930

ENSMEUP00000011040

0.924

SMC1B

0.922

RANGAP1

0.922

ENSMEUP00000001465

0.913

ENSMEUP00000001125

0.894

Your Current Organism:

Notamacropus eugenii

NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby

Export your current network:

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same PNG format, but at higher resolution

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMEUP00000001125	ENSMEUP00000001465	ENSMEUP00000001125	ENSMEUP00000001465	annotation not available	annotation not available	0.948
ENSMEUP00000001125	ENSMEUP00000001656	ENSMEUP00000001125	ENSMEUP00000001656	annotation not available	annotation not available	0.770
ENSMEUP00000001125	ENSMEUP00000003989	ENSMEUP00000001125	ENSMEUP00000003989	annotation not available	annotation not available	0.894
ENSMEUP00000001125	ENSMEUP00000011194	ENSMEUP00000001125	ENSMEUP00000011194	annotation not available	annotation not available	0.908
ENSMEUP00000001125	ENSMEUP00000014420	ENSMEUP00000001125	ENSMEUP00000014420	annotation not available	annotation not available	0.923
ENSMEUP00000001465	ENSMEUP00000001125	ENSMEUP00000001465	ENSMEUP00000001125	annotation not available	annotation not available	0.948
ENSMEUP00000001465	ENSMEUP00000001656	ENSMEUP00000001465	ENSMEUP00000001656	annotation not available	annotation not available	0.671
ENSMEUP00000001465	ENSMEUP00000003989	ENSMEUP00000001465	ENSMEUP00000003989	annotation not available	annotation not available	0.913
ENSMEUP00000001465	ENSMEUP00000008664	ENSMEUP00000001465	ENSMEUP00000008664	annotation not available	annotation not available	0.577
ENSMEUP00000001465	ENSMEUP00000011040	ENSMEUP00000001465	ENSMEUP00000011040	annotation not available	annotation not available	0.552
ENSMEUP00000001465	ENSMEUP00000011194	ENSMEUP00000001465	ENSMEUP00000011194	annotation not available	annotation not available	0.913
ENSMEUP00000001465	ENSMEUP00000014420	ENSMEUP00000001465	ENSMEUP00000014420	annotation not available	annotation not available	0.978
ENSMEUP00000001465	SMC1B	ENSMEUP00000001465	ENSMEUP00000001127	annotation not available	Structural maintenance of chromosomes 1B.	0.554
ENSMEUP00000001656	ENSMEUP00000001125	ENSMEUP00000001656	ENSMEUP00000001125	annotation not available	annotation not available	0.770
ENSMEUP00000001656	ENSMEUP00000001465	ENSMEUP00000001656	ENSMEUP00000001465	annotation not available	annotation not available	0.671
ENSMEUP00000001656	ENSMEUP00000002382	ENSMEUP00000001656	ENSMEUP00000002382	annotation not available	annotation not available	0.602
ENSMEUP00000001656	ENSMEUP00000003989	ENSMEUP00000001656	ENSMEUP00000003989	annotation not available	annotation not available	0.981
ENSMEUP00000001656	ENSMEUP00000011040	ENSMEUP00000001656	ENSMEUP00000011040	annotation not available	annotation not available	0.913
ENSMEUP00000001656	ENSMEUP00000011194	ENSMEUP00000001656	ENSMEUP00000011194	annotation not available	annotation not available	0.804
ENSMEUP00000001656	ENSMEUP00000014420	ENSMEUP00000001656	ENSMEUP00000014420	annotation not available	annotation not available	0.987