close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG7SMG7 nonsense mediated mRNA decay factor. (1164 aa)    
Predicted Functional Partners:
ENSMEUP00000000425
annotation not available
   
 0.991
ENSMEUP00000012918
annotation not available
   
 0.980
RBM8A
RNA binding motif protein 8A.
    
 0.979
SMG5
SMG5 nonsense mediated mRNA decay factor.
   
 0.959
UPF3B
UPF3B regulator of nonsense mediated mRNA decay.
   
 0.941
SMG6
SMG6 nonsense mediated mRNA decay factor.
    
 0.930
ENSMEUP00000005172
annotation not available
   
 0.900
ENSMEUP00000006577
annotation not available
   
 0.900
ENSMEUP00000007221
annotation not available
    
 0.844
ENSMEUP00000001231
annotation not available
   
 
 0.830
Your Current Organism:
Notamacropus eugenii
NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.