Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UBE2BUbiquitin conjugating enzyme E2 B. (137 aa)    
Predicted Functional Partners:
RNF20
Ring finger protein 20.
    
 0.983
RNF40
Ring finger protein 40.
    
 0.983
ENSMEUP00000003147
annotation not available
    
 0.974
ENSMEUP00000012616
annotation not available
    
 0.969
PCNA
Proliferating cell nuclear antigen.
    
 0.939
ENSMEUP00000011115
annotation not available
    
 0.934
ENSMEUP00000015158
annotation not available
    
 0.922
TRIP12
Thyroid hormone receptor interactor 12.
    
 0.921
ENSMEUP00000008141
annotation not available
    
 0.912
UBR1
Ubiquitin protein ligase E3 component n-recognin 1.
    
 0.908
Your Current Organism:
Notamacropus eugenii
NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby
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