AVPR1A protein (Notamacropus eugenii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AVPR1A

Arginine vasopressin receptor 1A. (413 aa)

Predicted Functional Partners:

ENSMEUP00000000127

0.991

ENSMEUP00000006995

0.991

GNAL

0.934

GNA13

0.916

ENSMEUP00000005445

0.916

ENSMEUP00000008053

0.908

ENSMEUP00000011236

0.902

EDN1

0.893

ENSMEUP00000007001

0.884

GNAQ

0.884

Your Current Organism:

Notamacropus eugenii

NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AVPR1A	EDN1	ENSMEUP00000004332	ENSMEUP00000012622	Arginine vasopressin receptor 1A.	Endothelin 1.	0.893
AVPR1A	ENSMEUP00000000127	ENSMEUP00000004332	ENSMEUP00000000127	Arginine vasopressin receptor 1A.	annotation not available	0.991
AVPR1A	ENSMEUP00000005445	ENSMEUP00000004332	ENSMEUP00000005445	Arginine vasopressin receptor 1A.	annotation not available	0.916
AVPR1A	ENSMEUP00000006995	ENSMEUP00000004332	ENSMEUP00000006995	Arginine vasopressin receptor 1A.	annotation not available	0.991
AVPR1A	ENSMEUP00000007001	ENSMEUP00000004332	ENSMEUP00000007001	Arginine vasopressin receptor 1A.	annotation not available	0.884
AVPR1A	ENSMEUP00000008053	ENSMEUP00000004332	ENSMEUP00000008053	Arginine vasopressin receptor 1A.	annotation not available	0.908
AVPR1A	ENSMEUP00000011236	ENSMEUP00000004332	ENSMEUP00000011236	Arginine vasopressin receptor 1A.	annotation not available	0.902
AVPR1A	GNA13	ENSMEUP00000004332	ENSMEUP00000001229	Arginine vasopressin receptor 1A.	G protein subunit alpha 13.	0.916
AVPR1A	GNAL	ENSMEUP00000004332	ENSMEUP00000011370	Arginine vasopressin receptor 1A.	G protein subunit alpha L.	0.934
AVPR1A	GNAQ	ENSMEUP00000004332	ENSMEUP00000013472	Arginine vasopressin receptor 1A.	G protein subunit alpha q.	0.884
EDN1	AVPR1A	ENSMEUP00000012622	ENSMEUP00000004332	Endothelin 1.	Arginine vasopressin receptor 1A.	0.893
EDN1	ENSMEUP00000007001	ENSMEUP00000012622	ENSMEUP00000007001	Endothelin 1.	annotation not available	0.465
EDN1	ENSMEUP00000008053	ENSMEUP00000012622	ENSMEUP00000008053	Endothelin 1.	annotation not available	0.753
EDN1	ENSMEUP00000011236	ENSMEUP00000012622	ENSMEUP00000011236	Endothelin 1.	annotation not available	0.621
EDN1	GNAQ	ENSMEUP00000012622	ENSMEUP00000013472	Endothelin 1.	G protein subunit alpha q.	0.465
ENSMEUP00000000127	AVPR1A	ENSMEUP00000000127	ENSMEUP00000004332	annotation not available	Arginine vasopressin receptor 1A.	0.991
ENSMEUP00000000127	ENSMEUP00000006995	ENSMEUP00000000127	ENSMEUP00000006995	annotation not available	annotation not available	0.894
ENSMEUP00000000127	ENSMEUP00000008053	ENSMEUP00000000127	ENSMEUP00000008053	annotation not available	annotation not available	0.971
ENSMEUP00000005445	AVPR1A	ENSMEUP00000005445	ENSMEUP00000004332	annotation not available	Arginine vasopressin receptor 1A.	0.916
ENSMEUP00000005445	ENSMEUP00000007001	ENSMEUP00000005445	ENSMEUP00000007001	annotation not available	annotation not available	0.466