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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF40Ring finger protein 40. (969 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.989
RNF20
Ring finger protein 20.
  
0.987
UBE2A
Ubiquitin conjugating enzyme E2 A.
    
 0.922
UBE2B
Ubiquitin conjugating enzyme E2 B.
    
 0.922
ENSMEUP00000006377
annotation not available
   
 0.907
ENSMEUP00000009451
annotation not available
    
 0.901
CDC73
Cell division cycle 73.
   
 0.888
PAF1
PAF1 homolog, Paf1/RNA polymerase II complex component.
    
 0.879
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
   
 0.821
TFIP11
Tuftelin interacting protein 11.
   
   0.738
Your Current Organism:
Notamacropus eugenii
NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.