Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KHDC4KH domain containing 4, pre-mRNA splicing factor. (608 aa)    
Predicted Functional Partners:
ENSMEUP00000008280
annotation not available
    
 
 0.880
RRP9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
      
 0.846
ENSMEUP00000014791
annotation not available
   
  
 0.833
LMF1
Lipase maturation factor 1.
      
 0.777
STARD7
StAR related lipid transfer domain containing 7.
    
   0.701
FUBP3
Far upstream element binding protein 3.
      
 0.635
CHERP
Calcium homeostasis endoplasmic reticulum protein.
      
 0.583
ENSMEUP00000014490
annotation not available
      
 0.579
ENSMEUP00000003988
annotation not available
   
  
 0.567
ENSMEUP00000011011
annotation not available
   
  
 0.567
Your Current Organism:
Notamacropus eugenii
NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby
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