Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABTB1Ankyrin repeat and BTB domain containing 1. (478 aa)    
Predicted Functional Partners:
ENSMEUP00000008199
annotation not available
    
 
 0.960
CARS1
cysteinyl-tRNA synthetase 1.
   
   0.957
VARS2
valyl-tRNA synthetase 2, mitochondrial.
    
   0.905
VARS1
valyl-tRNA synthetase 1.
   
   0.903
CUL3
Cullin 3.
   
 0.877
EEF1A2
Eukaryotic translation elongation factor 1 alpha 2.
    
   0.853
ENSMEUP00000010056
annotation not available
    
   0.853
RNF7
Ring finger protein 7.
    
 0.841
RBX1
Ring-box 1.
    
 0.841
ENSMEUP00000008632
annotation not available
   
 0.818
Your Current Organism:
Notamacropus eugenii
NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby
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