Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
USP48Ubiquitin specific peptidase 48. (999 aa)    
Predicted Functional Partners:
UBA6
Ubiquitin like modifier activating enzyme 6.
   
 
 0.962
TRAF2
TNF receptor associated factor 2.
    
 0.959
ENSMEUP00000003505
annotation not available
    
 0.959
ENSMEUP00000012040
annotation not available
    
   0.954
TRIP12
Thyroid hormone receptor interactor 12.
   
 
 0.937
RELA
RELA proto-oncogene, NF-kB subunit.
    
 0.918
ENSMEUP00000001988
annotation not available
    
   0.909
RNF123
Ring finger protein 123.
    
   0.894
ENSMEUP00000001925
annotation not available
    
 
 0.830
GPS1
G protein pathway suppressor 1.
    
   0.799
Your Current Organism:
Notamacropus eugenii
NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby
Server load: low (28%) [HD]