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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRMT61AtRNA methyltransferase 61A. (279 aa)    
Predicted Functional Partners:
TRMT6
tRNA methyltransferase 6.
   
 0.999
ENSMEUP00000004767
annotation not available
   
    0.908
METTL1
Methyltransferase like 1.
  
 
 0.903
BOP1
BOP1 ribosomal biogenesis factor.
   
    0.861
RCL1
RNA terminal phosphate cyclase like 1.
   
    0.859
FTSJ3
FtsJ RNA 2'-O-methyltransferase 3.
   
  
 0.858
ENSMEUP00000011615
annotation not available
  
  
 0.845
TSR1
TSR1 ribosome maturation factor.
   
    0.840
DDX55
DEAD-box helicase 55.
  
   0.837
DDX56
DEAD-box helicase 56.
  
   0.801
Your Current Organism:
Notamacropus eugenii
NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.