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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX39ADExD-box helicase 39A. (422 aa)    
Predicted Functional Partners:
ALYREF
Aly/REF export factor.
   
 0.988
THOC2
THO complex 2.
   
 0.982
SARNP
SAP domain containing ribonucleoprotein.
   
 0.971
EIF4A3
Eukaryotic translation initiation factor 4A3.
  
0.962
RBM8A
RNA binding motif protein 8A.
   
 0.954
THOC5
THO complex 5.
   
 0.952
THOC1
THO complex 1.
   
 0.951
POLDIP3
DNA polymerase delta interacting protein 3.
   
 0.951
THOC7
THO complex 7.
   
 0.945
ENSMEUP00000006561
annotation not available
   
 0.935
Your Current Organism:
Notamacropus eugenii
NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.