STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX1DEAD-box helicase 1. (733 aa)    
Predicted Functional Partners:
RTRAF
RNA transcription, translation and transport factor.
   
 0.988
ENSMEUP00000007133
annotation not available
   
 0.972
ENSMEUP00000008087
annotation not available
   
 
 0.963
C2orf49
Chromosome 2 open reading frame 49.
    
 0.914
ENSMEUP00000014489
annotation not available
   
 0.783
DHX15
DEAH-box helicase 15.
  
 0.781
SF3B3
Splicing factor 3b subunit 3.
    
 0.773
ENSMEUP00000008972
annotation not available
   
 0.769
RBM8A
RNA binding motif protein 8A.
    
 0.763
FAM98C
Family with sequence similarity 98 member C.
   
 
 0.762
Your Current Organism:
Notamacropus eugenii
NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.