STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGEF1Rho guanine nucleotide exchange factor 1. (833 aa)    
Predicted Functional Partners:
GNA13
G protein subunit alpha 13.
    
 0.990
ENSMEUP00000005445
annotation not available
    
 0.964
ENSMEUP00000006642
annotation not available
    
 0.865
ENSMEUP00000004844
annotation not available
   
 0.821
ENSMEUP00000006325
annotation not available
    
0.820
PLEKHG5
Pleckstrin homology and RhoGEF domain containing G5.
    
0.813
ARHGEF11
Rho guanine nucleotide exchange factor 11.
     
0.813
ENSMEUP00000002936
annotation not available
   
 
 0.806
ENSMEUP00000015026
annotation not available
  
  
 
0.805
PTK2B
Protein tyrosine kinase 2 beta.
   
 
 0.804
Your Current Organism:
Notamacropus eugenii
NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.