STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFA47313.1Putative haloacid dehalogenase, IA family protein. (213 aa)    
Predicted Functional Partners:
thiE2
Thiamine-phosphate pyrophosphorylase ThiE2; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
     0.945
thiD
Phosphomethylpyrimidine kinase ThiD.
      0.932
thiM
Hydroxyethylthiazole kinase ThiM; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.
 
     0.847
ptsG
Glucose-specific phosphotransferase system (PTS) IIABC components.
  
  
 0.719
AFA47837.1
Hypothetical protein containing CGCAxxGCC motif.
 
      0.649
emrE
Multidrug resistance efflux transporter EmrE.
       0.631
amyB
Amylopullulanase AmyB; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.545
pyk
Pyruvate kinase Pyk; Belongs to the pyruvate kinase family.
  
  
 0.437
mgsA
Methylglyoxal synthase MgsA; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.
  
  
 0.427
guaA2
GMP synthase GuaA2; Catalyzes the synthesis of GMP from XMP.
  
  
 0.424
Your Current Organism:
Acetobacterium woodii
NCBI taxonomy Id: 931626
Other names: A. woodii DSM 1030, Acetobacterium woodii ATCC 29683, Acetobacterium woodii DSM 1030, Acetobacterium woodii WB1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.