STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFA48244.1Hydroxyindole O-methyltransferase. (515 aa)    
Predicted Functional Partners:
AFA48242.1
B12-binding methylthiotransferase.
 
    0.929
AFA48243.1
B12-binding methylthiotransferase.
 
    0.921
cobT2
Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase CobT2; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
 
   
 0.804
AFA49428.1
Hypothetical protein.
 
     0.609
thiC2
Thiamine biosynthesis protein ThiC2.
 
     0.577
AFA49710.1
Hypothetical protein.
 
     0.575
thiC3
Thiamine biosynthesis protein ThiC3.
 
     0.541
AFA47638.1
Hypothetical protein DUF1638.
 
     0.532
obg
GTPase Obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.
   
  
 0.519
mttB18
Methyltransferase 1 MttB18.
  
     0.487
Your Current Organism:
Acetobacterium woodii
NCBI taxonomy Id: 931626
Other names: A. woodii DSM 1030, Acetobacterium woodii ATCC 29683, Acetobacterium woodii DSM 1030, Acetobacterium woodii WB1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.