STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFA49074.1acyl-CoA synthetase. (621 aa)    
Predicted Functional Partners:
bacA
Bacitracin synthase 1; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 0.999
carE
Electron transfer flavoprotein alpha subunit CarE; Caffeyl-CoA reductase-Etf complex catalyzes the reduction of caffeyl-CoA to yield hydrocaffeyl-CoA. It couples the endergonic ferredoxin reduction with NADH as reductant to the exergonic reduction of caffeoyl-CoA with the same reductant. It uses the mechanism of electron bifurcation to overcome the steep energy barrier in ferredoxin reduction. The electron transfer flavoprotein (Etf) mediates the electron transfer between the different donors and acceptors. The iron- sulfur cluster may be involved in electron transport, possibly in the [...]
  
 0.990
hydB
Iron hydrogenase HydB.
  
 0.981
fabD
malonyl-CoA-[acyl carrier protein] transacylase FabD.
 
 0.978
AFA47968.1
Hypothetical protein NmrA family.
  
 0.966
carC
caffeyl-CoA reductase CarC; The Caffeyl-CoA reductase-Etf complex catalyzes the reduction of caffeyl-CoA to yield hydrocaffeyl-CoA. It couples the endergonic ferredoxin reduction with NADH as reductant to the exergonic reduction of caffeoyl-CoA with the same reductant. It uses the mechanism of electron bifurcation to overcome the steep energy barrier in ferredoxin reduction. Also reduces 4-coumaroyl-CoA and feruloyl-CoA.
 
 
 0.949
fabF
3-oxoacyl-[acyl-carrier-protein] synthase FabF; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
 0.937
rplU
50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
  
 
 0.937
nifJ
Pyruvate:ferredoxin oxidoreductase NifJ; Flavodoxin.
  
 0.937
nuoG
NADH:quinone oxidoreductase subunit G.
  
 0.923
Your Current Organism:
Acetobacterium woodii
NCBI taxonomy Id: 931626
Other names: A. woodii DSM 1030, Acetobacterium woodii ATCC 29683, Acetobacterium woodii DSM 1030, Acetobacterium woodii WB1
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