STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHB55243.1KEGG: mjl:Mjls_0351 hypothetical protein. (101 aa)    
Predicted Functional Partners:
EHB56233.1
KEGG: mjl:Mjls_0914 putative protein UsfY.
  
  
 0.758
EHB55244.1
PFAM: CoA-transferase family III; KEGG: msm:MSMEG_2468 L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
       0.689
EHB55245.1
PFAM: Acyl-CoA thioesterase; KEGG: mva:Mvan_2198 acyl-CoA thioesterase.
       0.689
EHB55242.1
KEGG: mjl:Mjls_2917 hypothetical protein.
       0.533
EHB55241.1
Phosphodiesterase, MJ0936 family; KEGG: msm:MSMEG_6343 hypothetical protein; TIGRFAM: Phosphodiesterase MJ0936; PFAM: Metallo-dependent phosphatase.
       0.523
EHB58104.1
Alanine--glyoxylate transaminase; KEGG: msm:MSMEG_0782 aminotransferase class-III; PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
    0.495
EHB58526.1
TIGRFAM: L-lysine 6-transaminase; KEGG: msm:MSMEG_1764 L-lysine aminotransferase; PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
    0.495
EHB53409.1
Alanine--glyoxylate transaminase; KEGG: scb:SCAB_3821 putative aminotransferase; PFAM: Aminotransferase class-III; Aminoglycoside phosphotransferase.
  
    0.495
EHB50366.1
TIGRFAM: 4-aminobutyrate aminotransferase, bacterial; KEGG: mmi:MMAR_2118 4-aminobutyrate aminotransferase; PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
    0.495
EHB47806.1
Acetylornithine transaminase; KEGG: mva:Mvan_1823 hypothetical protein; PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
    0.495
Your Current Organism:
Mycolicibacterium rhodesiae JS60
NCBI taxonomy Id: 931627
Other names: M. rhodesiae JS60, Mycobacterium rhodesiae JS60
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.