Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EHB50341.1 | EHB50343.1 | MycrhDRAFT_4767 | MycrhDRAFT_4769 | TIGRFAM: Acyl-CoA thioesterase; KEGG: mjl:Mjls_2288 acyl-CoA thioesterase II; PFAM: Acyl-CoA thioesterase. | KEGG: sen:SACE_3949 hypothetical protein. | 0.541 |
| EHB50341.1 | pdxS | MycrhDRAFT_4767 | MycrhDRAFT_4766 | TIGRFAM: Acyl-CoA thioesterase; KEGG: mjl:Mjls_2288 acyl-CoA thioesterase II; PFAM: Acyl-CoA thioesterase. | Pyridoxal biosynthesis lyase pdxS; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. | 0.941 |
| EHB50341.1 | pdxT | MycrhDRAFT_4767 | MycrhDRAFT_4768 | TIGRFAM: Acyl-CoA thioesterase; KEGG: mjl:Mjls_2288 acyl-CoA thioesterase II; PFAM: Acyl-CoA thioesterase. | Glutamine amidotransferase subunit pdxT; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS. | 0.937 |
| EHB50343.1 | EHB50341.1 | MycrhDRAFT_4769 | MycrhDRAFT_4767 | KEGG: sen:SACE_3949 hypothetical protein. | TIGRFAM: Acyl-CoA thioesterase; KEGG: mjl:Mjls_2288 acyl-CoA thioesterase II; PFAM: Acyl-CoA thioesterase. | 0.541 |
| EHB50343.1 | pdxS | MycrhDRAFT_4769 | MycrhDRAFT_4766 | KEGG: sen:SACE_3949 hypothetical protein. | Pyridoxal biosynthesis lyase pdxS; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. | 0.541 |
| EHB50343.1 | pdxT | MycrhDRAFT_4769 | MycrhDRAFT_4768 | KEGG: sen:SACE_3949 hypothetical protein. | Glutamine amidotransferase subunit pdxT; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS. | 0.541 |
| pdxS | EHB50341.1 | MycrhDRAFT_4766 | MycrhDRAFT_4767 | Pyridoxal biosynthesis lyase pdxS; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. | TIGRFAM: Acyl-CoA thioesterase; KEGG: mjl:Mjls_2288 acyl-CoA thioesterase II; PFAM: Acyl-CoA thioesterase. | 0.941 |
| pdxS | EHB50343.1 | MycrhDRAFT_4766 | MycrhDRAFT_4769 | Pyridoxal biosynthesis lyase pdxS; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. | KEGG: sen:SACE_3949 hypothetical protein. | 0.541 |
| pdxS | pdxT | MycrhDRAFT_4766 | MycrhDRAFT_4768 | Pyridoxal biosynthesis lyase pdxS; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. | Glutamine amidotransferase subunit pdxT; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS. | 0.999 |
| pdxT | EHB50341.1 | MycrhDRAFT_4768 | MycrhDRAFT_4767 | Glutamine amidotransferase subunit pdxT; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS. | TIGRFAM: Acyl-CoA thioesterase; KEGG: mjl:Mjls_2288 acyl-CoA thioesterase II; PFAM: Acyl-CoA thioesterase. | 0.937 |
| pdxT | EHB50343.1 | MycrhDRAFT_4768 | MycrhDRAFT_4769 | Glutamine amidotransferase subunit pdxT; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS. | KEGG: sen:SACE_3949 hypothetical protein. | 0.541 |
| pdxT | pdxS | MycrhDRAFT_4768 | MycrhDRAFT_4766 | Glutamine amidotransferase subunit pdxT; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS. | Pyridoxal biosynthesis lyase pdxS; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. | 0.999 |