STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378905_00019Unannotated protein. (846 aa)    
Predicted Functional Partners:
GCA_000378905_00672
Unannotated protein.
   
 0.882
GCA_000378905_00716
Unannotated protein.
    
 0.862
GCA_000378905_00795
Unannotated protein.
   
  0.846
GCA_000378905_00484
Unannotated protein.
    
  0.845
GCA_000378905_00779
Unannotated protein.
    
  0.845
GCA_000378905_00469
Unannotated protein.
   
 
 0.838
GCA_000378905_00801
Unannotated protein.
   
 
 0.836
GCA_000378905_00526
Unannotated protein.
    
 0.759
GCA_000378905_00117
Unannotated protein.
 
 
 0.661
GCA_000378905_00147
Unannotated protein.
   
 0.610
Your Current Organism:
actinobacterium SCGC AAA028A23
NCBI taxonomy Id: 932036
Other names: a. SCGC AAA028-A23, actinobacterium SCGC AAA028-A23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.