STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378905_00540Unannotated protein. (341 aa)    
Predicted Functional Partners:
GCA_000378905_00541
Unannotated protein.
 
 0.999
GCA_000378905_00542
Unannotated protein.
 
 0.999
GCA_000378905_00549
Unannotated protein.
    
 0.940
GCA_000378905_00717
Unannotated protein.
  
 
 0.927
GCA_000378905_00502
Unannotated protein.
  
 
 0.782
GCA_000378905_00373
Unannotated protein.
    
  0.772
GCA_000378905_00645
Unannotated protein.
    
  0.772
GCA_000378905_00268
Unannotated protein.
 
   
  0.747
GCA_000378905_00055
Unannotated protein.
    
 0.696
GCA_000378905_00853
Unannotated protein.
 
  
 0.669
Your Current Organism:
actinobacterium SCGC AAA028A23
NCBI taxonomy Id: 932036
Other names: a. SCGC AAA028-A23, actinobacterium SCGC AAA028-A23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.