STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALS58440.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (450 aa)    
Predicted Functional Partners:
ALS58442.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.801
ALS58441.1
Dipeptide epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.778
ALS61843.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.626
ALS58439.1
Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.622
ALS58438.1
Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.550
ALS61687.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.535
ALS62932.1
Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.520
ALS59411.1
Involved in the transport of aldohexuronates; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.507
ALS62933.1
Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.420
ALS58455.1
Sugar phosphate permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.403
Your Current Organism:
Pandoraea norimbergensis
NCBI taxonomy Id: 93219
Other names: ATCC BAA-65, Burkholderia norimbergensis, CCUG 39188, CFBP 4792, CIP 105463, DSM 11628, JCM 10565, LMG 18379, LMG:18379, NCTC 13162, P. norimbergensis, strain R2
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