Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALS59698.1 | ALS59699.1 | AT302_07955 | AT302_07960 | Alpha-2-macroglobulin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fusaric acid resistance protein FusB / fusaric acid resistance protein FusC; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.497 |
ALS59698.1 | ALS63126.1 | AT302_07955 | AT302_07945 | Alpha-2-macroglobulin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Penicillin-binding protein 1C; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.953 |
ALS59698.1 | AOX47978.1 | AT302_07955 | AT302_07950 | Alpha-2-macroglobulin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.723 |
ALS59699.1 | ALS59698.1 | AT302_07960 | AT302_07955 | Fusaric acid resistance protein FusB / fusaric acid resistance protein FusC; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alpha-2-macroglobulin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.497 |
ALS59699.1 | ALS62559.1 | AT302_07960 | AT302_24945 | Fusaric acid resistance protein FusB / fusaric acid resistance protein FusC; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fe-S cluster assembly scaffold IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. | 0.590 |
ALS59699.1 | ALS63126.1 | AT302_07960 | AT302_07945 | Fusaric acid resistance protein FusB / fusaric acid resistance protein FusC; Derived by automated computational analysis using gene prediction method: Protein Homology. | Penicillin-binding protein 1C; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.465 |
ALS59699.1 | AOX47978.1 | AT302_07960 | AT302_07950 | Fusaric acid resistance protein FusB / fusaric acid resistance protein FusC; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.468 |
ALS62559.1 | ALS59699.1 | AT302_24945 | AT302_07960 | Fe-S cluster assembly scaffold IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. | Fusaric acid resistance protein FusB / fusaric acid resistance protein FusC; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.590 |
ALS63126.1 | ALS59698.1 | AT302_07945 | AT302_07955 | Penicillin-binding protein 1C; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alpha-2-macroglobulin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.953 |
ALS63126.1 | ALS59699.1 | AT302_07945 | AT302_07960 | Penicillin-binding protein 1C; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fusaric acid resistance protein FusB / fusaric acid resistance protein FusC; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.465 |
ALS63126.1 | AOX47978.1 | AT302_07945 | AT302_07950 | Penicillin-binding protein 1C; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.768 |
AOX47978.1 | ALS59698.1 | AT302_07950 | AT302_07955 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Alpha-2-macroglobulin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.723 |
AOX47978.1 | ALS59699.1 | AT302_07950 | AT302_07960 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Fusaric acid resistance protein FusB / fusaric acid resistance protein FusC; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.468 |
AOX47978.1 | ALS63126.1 | AT302_07950 | AT302_07945 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Penicillin-binding protein 1C; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.768 |