Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALS61949.1 | ALS62195.1 | AT302_21380 | AT302_22785 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.429 |
ALS62194.1 | ALS62195.1 | AT302_22780 | AT302_22785 | GTP-binding protein TypA; Derived by automated computational analysis using gene prediction method: Protein Homology. | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.430 |
ALS62195.1 | ALS61949.1 | AT302_22785 | AT302_21380 | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.429 |
ALS62195.1 | ALS62194.1 | AT302_22785 | AT302_22780 | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | GTP-binding protein TypA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.430 |
ALS62195.1 | ALS62196.1 | AT302_22785 | AT302_22790 | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.549 |
ALS62195.1 | ALS63497.1 | AT302_22785 | AT302_22795 | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.554 |
ALS62195.1 | emrB-2 | AT302_22785 | AT302_22800 | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Multidrug resistance protein B; Multidrug MFS transporte; with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily. | 0.462 |
ALS62196.1 | ALS62195.1 | AT302_22790 | AT302_22785 | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.549 |
ALS62196.1 | ALS63497.1 | AT302_22790 | AT302_22795 | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.879 |
ALS62196.1 | emrB-2 | AT302_22790 | AT302_22800 | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Multidrug resistance protein B; Multidrug MFS transporte; with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily. | 0.628 |
ALS63497.1 | ALS62195.1 | AT302_22795 | AT302_22785 | Derived by automated computational analysis using gene prediction method: Protein Homology. | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.554 |
ALS63497.1 | ALS62196.1 | AT302_22795 | AT302_22790 | Derived by automated computational analysis using gene prediction method: Protein Homology. | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.879 |
ALS63497.1 | emrB-2 | AT302_22795 | AT302_22800 | Derived by automated computational analysis using gene prediction method: Protein Homology. | Multidrug resistance protein B; Multidrug MFS transporte; with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily. | 0.942 |
emrB-2 | ALS62195.1 | AT302_22800 | AT302_22785 | Multidrug resistance protein B; Multidrug MFS transporte; with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily. | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.462 |
emrB-2 | ALS62196.1 | AT302_22800 | AT302_22790 | Multidrug resistance protein B; Multidrug MFS transporte; with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily. | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.628 |
emrB-2 | ALS63497.1 | AT302_22800 | AT302_22795 | Multidrug resistance protein B; Multidrug MFS transporte; with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily. | Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.942 |