STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALS62575.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (391 aa)    
Predicted Functional Partners:
ALS62574.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.962
ALS62576.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.612
ALS62573.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.599
ALS63539.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.464
ALS60505.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.447
ALS58511.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.423
ALS63540.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.405
Your Current Organism:
Pandoraea norimbergensis
NCBI taxonomy Id: 93219
Other names: ATCC BAA-65, Burkholderia norimbergensis, CCUG 39188, CFBP 4792, CIP 105463, DSM 11628, JCM 10565, LMG 18379, LMG:18379, NCTC 13162, P. norimbergensis, strain R2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.