STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANC46881.1Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology. (677 aa)    
Predicted Functional Partners:
ANC42931.1
Conjugal transfer protein TrbC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.951
ANC42929.1
Conjugal transfer protein TrbE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.949
A6P55_00225
Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.948
ANC42930.1
Conjugal transfer protein TrbD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.947
ANC42933.1
CopG family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.946
ANC42932.1
P-type conjugative transfer ATPase TrbB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.919
ANC42924.1
Conjugal transfer protein TrbI; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.908
ANC42925.1
P-type conjugative transfer protein TrbG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.873
ANC42927.1
Conjugal transfer protein TrbL; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.864
ANC42926.1
Conjugal transfer protein TrbF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.862
Your Current Organism:
Pandoraea pnomenusa
NCBI taxonomy Id: 93220
Other names: ATCC BAA-63, ATCC:BAA:63, CCM 4978, CCUG 38742, CIP 106626, DSM 16536, LMG 18087, LMG:18087, NCTC 13160, P. pnomenusa, Pandoraea pnomenusa Coenye et al. 2000, Pandoraea sp. RB-44
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