Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AJC19484.1 | opuCC | RO07_01445 | RO07_05030 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.626 |
| AJC20054.1 | opuCC | RO07_05440 | RO07_05030 | DUF1269 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.626 |
| AJC20128.1 | opuCC | RO07_05960 | RO07_05030 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.626 |
| AJC20747.1 | opuCC | RO07_10185 | RO07_05030 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.626 |
| AJC21392.1 | opuCC | RO07_14500 | RO07_05030 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.626 |
| AJC22381.1 | opuCC | RO07_21270 | RO07_05030 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.626 |
| APD13315.1 | opuCC | RO07_11630 | RO07_05030 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.626 |
| opuCC | AJC19484.1 | RO07_05030 | RO07_01445 | Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.626 |
| opuCC | AJC20054.1 | RO07_05030 | RO07_05440 | Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DUF1269 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.626 |
| opuCC | AJC20128.1 | RO07_05030 | RO07_05960 | Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.626 |
| opuCC | AJC20747.1 | RO07_05030 | RO07_10185 | Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.626 |
| opuCC | AJC21392.1 | RO07_05030 | RO07_14500 | Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.626 |
| opuCC | AJC22381.1 | RO07_05030 | RO07_21270 | Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.626 |
| opuCC | APD13315.1 | RO07_05030 | RO07_11630 | Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.626 |
| opuCC | proV | RO07_05030 | RO07_05020 | Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycine/betaine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| opuCC | yehW_1 | RO07_05030 | RO07_05035 | Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycine/betaine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| opuCC | yehW_2 | RO07_05030 | RO07_05025 | Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Choline ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| proV | opuCC | RO07_05020 | RO07_05030 | Glycine/betaine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| proV | yehW_1 | RO07_05020 | RO07_05035 | Glycine/betaine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycine/betaine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.997 |
| proV | yehW_2 | RO07_05020 | RO07_05025 | Glycine/betaine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Choline ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
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