Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AJC21452.1 | cysB_1 | RO07_14920 | RO07_14915 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. | 0.606 |
AJC21452.1 | cysD | RO07_14920 | RO07_14930 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sulfate adenylyltransferase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.447 |
AJC21452.1 | cysH | RO07_14920 | RO07_14925 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. | 0.665 |
AJC21452.1 | lldD | RO07_14920 | RO07_01475 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alpha-hydroxy-acid oxidizing enzyme; Flavin mononucleotide-dependent dehydrogenase; functions in aerobic respiration and also has a role in anaerobic nitrate respiration; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.590 |
AJC21452.1 | mdlB | RO07_14920 | RO07_15460 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alpha-hydroxy-acid oxidizing enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.590 |
cysB_1 | AJC21452.1 | RO07_14915 | RO07_14920 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.606 |
cysD | AJC21452.1 | RO07_14930 | RO07_14920 | Sulfate adenylyltransferase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.447 |
cysD | cysH | RO07_14930 | RO07_14925 | Sulfate adenylyltransferase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. | 0.995 |
cysH | AJC21452.1 | RO07_14925 | RO07_14920 | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.665 |
cysH | cysD | RO07_14925 | RO07_14930 | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. | Sulfate adenylyltransferase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.995 |
lldD | AJC21452.1 | RO07_01475 | RO07_14920 | Alpha-hydroxy-acid oxidizing enzyme; Flavin mononucleotide-dependent dehydrogenase; functions in aerobic respiration and also has a role in anaerobic nitrate respiration; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.590 |
mdlB | AJC21452.1 | RO07_15460 | RO07_14920 | Alpha-hydroxy-acid oxidizing enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.590 |