| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| braC_9 | dat_3 | RO07_23915 | RO07_23925 | Branched chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Branched-chain amino acid transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.778 |
| braC_9 | def_3 | RO07_23915 | RO07_23920 | Branched chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.775 |
| dat_3 | braC_9 | RO07_23925 | RO07_23915 | Branched-chain amino acid transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Branched chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.778 |
| dat_3 | def_3 | RO07_23925 | RO07_23920 | Branched-chain amino acid transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.776 |
| dat_3 | rplI | RO07_23925 | RO07_19505 | Branched-chain amino acid transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L9; Binds to the 23S rRNA. | 0.663 |
| dat_3 | rplT | RO07_23925 | RO07_23430 | Branched-chain amino acid transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.668 |
| dat_3 | rplX | RO07_23925 | RO07_06840 | Branched-chain amino acid transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.677 |
| dat_3 | rplY | RO07_23925 | RO07_11155 | Branched-chain amino acid transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L25/general stress protein Ctc; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.672 |
| dat_3 | rpsO | RO07_23925 | RO07_23620 | Branched-chain amino acid transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.670 |
| dat_3 | rpsT | RO07_23925 | RO07_03310 | Branched-chain amino acid transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.724 |
| dat_3 | rpsU | RO07_23925 | RO07_24775 | Branched-chain amino acid transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S21; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS21 family. | 0.717 |
| dat_3 | tig | RO07_23925 | RO07_22400 | Branched-chain amino acid transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.756 |
| def_3 | braC_9 | RO07_23920 | RO07_23915 | Hypothetical protein; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Branched chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.775 |
| def_3 | dat_3 | RO07_23920 | RO07_23925 | Hypothetical protein; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Branched-chain amino acid transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.776 |
| def_3 | rplI | RO07_23920 | RO07_19505 | Hypothetical protein; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 50S ribosomal protein L9; Binds to the 23S rRNA. | 0.717 |
| def_3 | rplT | RO07_23920 | RO07_23430 | Hypothetical protein; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.710 |
| def_3 | rplX | RO07_23920 | RO07_06840 | Hypothetical protein; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.696 |
| def_3 | rplY | RO07_23920 | RO07_11155 | Hypothetical protein; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 50S ribosomal protein L25/general stress protein Ctc; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.703 |
| def_3 | rpsO | RO07_23920 | RO07_23620 | Hypothetical protein; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.697 |
| def_3 | rpsT | RO07_23920 | RO07_03310 | Hypothetical protein; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.713 |
STRING v12.5 is now available!
