STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
andAc_2Rieske (2Fe-2S) protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (371 aa)    
Predicted Functional Partners:
andAd
Salicylate hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.918
bphE
3-phenylpropionate dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.913
hmp_1
Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.842
AJC21484.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.715
ascD_1
CDP-6-deoxy-delta-3,4-glucoseen reductase; Catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.708
AJC22019.1
Phasin (PHA-granule associated protein); Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.657
rnb
Ribonuclease II; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.656
AJC21513.1
DUF3460 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.656
AJC23598.2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.639
AJC22837.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.629
Your Current Organism:
Pandoraea pulmonicola
NCBI taxonomy Id: 93221
Other names: ATCC BAA-62, ATCC:BAA:62, CCUG 38759, CIP 106625, DSM 16583, LMG 18106, LMG:18106, NCTC 13159, P. pulmonicola, Pandoraea pulmonicola Coenye et al. 2000
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