STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC84486.1Hypothetical protein. (317 aa)    
Predicted Functional Partners:
EIC84485.1
COG0415 Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
  
  
 0.971
deoD
COG0813 Purine-nucleoside phosphorylase.
    
  0.688
ade
COG1001 Adenine deaminase.
 
  
  0.675
cobB
COG0846 NAD-dependent protein deacetylases, SIR2 family; Belongs to the sirtuin family. Class III subfamily.
    
 0.636
EIC84377.1
methylated-DNA--protein-cysteine methyltransferase; COG2169 Adenosine deaminase.
    
  0.629
EIC84386.1
methylated-DNA--protein-cysteine methyltransferase; COG2169 Adenosine deaminase.
    
  0.629
thiI
tRNA s(4)U8 sulfurtransferase; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.
 
     0.628
EIC84484.1
COG5212 Low-affinity cAMP phosphodiesterase.
       0.619
cpdB
Bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein; COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases; Belongs to the 5'-nucleotidase family.
   
 
  0.618
tadA
tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
   
 
  0.606
Your Current Organism:
Serratia sp. M24T3
NCBI taxonomy Id: 932213
Other names: S. sp. M24T3
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