Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cmpB_1 | ssuA_5 | NA29_10250 | NA29_15700 | Sulfonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.777 |
| cmpB_1 | ssuB_3 | NA29_10250 | NA29_18845 | Sulfonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sulfonate ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.587 |
| cmpB_1 | ssuD_1 | NA29_10250 | NA29_10265 | Sulfonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alkanesulfonate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.504 |
| ssuA_5 | cmpB_1 | NA29_15700 | NA29_10250 | Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sulfonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.777 |
| ssuA_5 | ssuB_3 | NA29_15700 | NA29_18845 | Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sulfonate ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.800 |
| ssuA_5 | ssuC_1 | NA29_15700 | NA29_06630 | Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sulfonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.732 |
| ssuA_5 | ssuC_11 | NA29_15700 | NA29_24425 | Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.711 |
| ssuA_5 | ssuC_7 | NA29_15700 | NA29_18850 | Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.860 |
| ssuA_5 | ssuC_9 | NA29_15700 | NA29_21410 | Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.713 |
| ssuA_5 | ssuD_1 | NA29_15700 | NA29_10265 | Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alkanesulfonate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.777 |
| ssuA_5 | ssuD_2 | NA29_15700 | NA29_15705 | Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alkanesulfonate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.883 |
| ssuA_5 | ssuD_3 | NA29_15700 | NA29_18855 | Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alkanesulfonate monooxygenase, FMNH(2)-dependent; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family. | 0.799 |
| ssuA_5 | ssuE | NA29_15700 | NA29_18860 | Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | FMN reductase (NADPH); Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.794 |
| ssuB_3 | cmpB_1 | NA29_18845 | NA29_10250 | Sulfonate ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | Sulfonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.587 |
| ssuB_3 | ssuA_5 | NA29_18845 | NA29_15700 | Sulfonate ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.800 |
| ssuB_3 | ssuC_1 | NA29_18845 | NA29_06630 | Sulfonate ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | Sulfonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.566 |
| ssuB_3 | ssuC_11 | NA29_18845 | NA29_24425 | Sulfonate ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.510 |
| ssuB_3 | ssuC_7 | NA29_18845 | NA29_18850 | Sulfonate ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.990 |
| ssuB_3 | ssuC_9 | NA29_18845 | NA29_21410 | Sulfonate ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.507 |
| ssuB_3 | ssuD_1 | NA29_18845 | NA29_10265 | Sulfonate ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | Alkanesulfonate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.853 |
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