STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJC19105.1Iron uptake protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (99 aa)    
Predicted Functional Partners:
AJC17730.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.970
AJC17729.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.953
fhuA_1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.779
AJC19104.1
Cobalt ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.771
fhuA_2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.765
APD12306.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.604
fcuA_5
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.598
hxuA_2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.589
hxuA_1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.587
AJC17233.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.543
Your Current Organism:
Pandoraea sputorum
NCBI taxonomy Id: 93222
Other names: ATCC BAA-64, ATCC:BAA:64, CCUG 45026, CIP 106624, DSM 21091, LMG 18819, LMG:18819, NCTC 13161, P. sputorum, Pandoraea sputorum Coenye et al. 2000
Server load: low (26%) [HD]