STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM42403.1Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (335 aa)    
Predicted Functional Partners:
SEM42456.1
Ribose transport system ATP-binding protein.
  0.960
SEM42493.1
Ribose transport system substrate-binding protein.
 
  0.938
SEO22281.1
Ribose transport system substrate-binding protein.
  
  0.867
rbsA-2
Rhamnose transport system ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  0.865
SEO21438.1
Ribose transport system substrate-binding protein.
  
  0.865
SEO15961.1
Ribose transport system substrate-binding protein.
 
  0.864
rbsA-3
Ribose transport system ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  0.864
SEO21409.1
Ribose transport system ATP-binding protein.
  0.863
SEM41943.1
Simple sugar transport system ATP-binding protein.
  0.855
SEM41969.1
Simple sugar transport system substrate-binding protein.
  0.846
Your Current Organism:
Gemmobacter aquatilis
NCBI taxonomy Id: 933059
Other names: ATCC 49971, DSM 3857, G. aquatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.