STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM43641.1Ceramide glucosyltransferase. (370 aa)    
Predicted Functional Partners:
SEM43614.1
Membrane protein DedA, SNARE-associated domain.
 
     0.954
SEM43586.1
Glycosyl transferase family 2.
 
  
  0.948
SEM43678.1
UDP-2,3-diacylglucosamine pyrophosphatase LpxH.
 
     0.909
SEN97209.1
Flp pilus assembly protein TadD, contains TPR repeats.
  
 
 0.890
SEN90731.1
Diguanylate cyclase/phosphodiesterase.
  
 
 0.789
SEN45831.1
Polysaccharide deacetylase.
  
 
 0.621
SEO12291.1
Chitin deacetylase.
  
 
 0.576
SEN71281.1
Signal transduction histidine kinase.
  
  
 0.554
SEO25333.1
PAS domain S-box-containing protein.
  
  
 0.554
SEN17189.1
Hypothetical protein.
  
 
 0.531
Your Current Organism:
Gemmobacter aquatilis
NCBI taxonomy Id: 933059
Other names: ATCC 49971, DSM 3857, G. aquatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.