STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM47704.1comF family protein. (240 aa)    
Predicted Functional Partners:
SEM52296.1
Flagellar motility protein MotE, a chaperone for MotC folding.
   
    0.929
SEM64783.1
DNA repair protein RadC; Belongs to the UPF0758 family.
 
    0.904
SEN24990.1
DNA processing protein.
 
 
 0.904
SEO11422.1
Magnesium chelatase family protein.
 
  
 0.887
SEO05556.1
DNA repair protein RadC; Belongs to the UPF0758 family.
 
    0.885
SEM46501.1
Flagellar basal-body rod protein FlgC; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
   
   0.874
SEM93318.1
Competence protein ComEC.
 
  
 0.809
SEM47600.1
DNA-binding transcriptional regulator, MarR family.
  
    0.792
fliP
Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
   
    0.787
SEO12891.1
Prephenate dehydrogenase.
   
  
 0.786
Your Current Organism:
Gemmobacter aquatilis
NCBI taxonomy Id: 933059
Other names: ATCC 49971, DSM 3857, G. aquatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.