STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM49632.1Membrane-bound lytic murein transglycosylase A. (344 aa)    
Predicted Functional Partners:
SEM49592.1
DNA-nicking endonuclease, Smr domain.
       0.867
SEM49667.1
Predicted lipid-binding transport protein, Tim44 family.
       0.867
SEM49699.1
UPF0716 protein FxsA.
       0.738
secB
Protein translocase subunit secB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.
       0.658
SEM60383.1
Glutamate synthase (NADPH) large subunit.
      
 0.459
SEO13126.1
Endonuclease/Exonuclease/phosphatase family protein.
  
     0.459
SEM64816.1
Phosphate transport system substrate-binding protein.
  
   
 0.458
SEN34403.1
Glycosyl transferase family 2.
  
     0.435
SEM82381.1
AsmA-like C-terminal region.
 
     0.413
SEO00916.1
Hypothetical protein.
  
     0.410
Your Current Organism:
Gemmobacter aquatilis
NCBI taxonomy Id: 933059
Other names: ATCC 49971, DSM 3857, G. aquatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.