STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM52473.1Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD. (522 aa)    
Predicted Functional Partners:
SEN60529.1
EF hand.
    
   0.867
atpA
ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.687
SEN50818.1
Dimethylamine/trimethylamine dehydrogenase.
     
 0.680
SEO04995.1
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD.
  
     0.680
SEM52445.1
Cytochrome C oxidase, cbb3-type, subunit III.
       0.655
SEN85118.1
NAD(P)-binding Rossmann-like domain-containing protein.
    
 0.562
SEN84245.1
Acyl transferase domain-containing protein.
  
  
 0.537
SEM52516.1
Pyridoxamine 5'-phosphate oxidase.
       0.532
SEM52558.1
Adenylate cyclase.
       0.532
rpsN
SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
 
 
   0.518
Your Current Organism:
Gemmobacter aquatilis
NCBI taxonomy Id: 933059
Other names: ATCC 49971, DSM 3857, G. aquatilis
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