STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM40794.1Predicted dehydrogenase. (356 aa)    
Predicted Functional Partners:
SEM41173.1
Inosose dehydratase.
  
 
  0.715
SEM77812.1
2-keto-myo-inositol dehydratase.
  
 
  0.646
SEM40824.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-).
  
    0.635
SEM40855.1
D-xylose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
       0.634
SEM77772.1
5-deoxy-glucuronate isomerase.
  
  
 0.607
SEO21309.1
D-psicose/D-tagatose/L-ribulose 3-epimerase.
 
 
  0.606
SEO21274.1
D-psicose/D-tagatose/L-ribulose 3-epimerase.
 
 
  0.591
SEM41142.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing); Belongs to the TPP enzyme family.
  
  
 0.590
SEN94337.1
2-keto-myo-inositol isomerase.
   
 
  0.527
SEM54186.1
NAD(P)H dehydrogenase (quinone).
   
 
  0.521
Your Current Organism:
Gemmobacter aquatilis
NCBI taxonomy Id: 933059
Other names: ATCC 49971, DSM 3857, G. aquatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.